Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx27Q3UHD6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Gm13036-201ENSMUST00000117799 748 ntBASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx27Q3UHD6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx27Q3UHD6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Gm8344-201ENSMUST00000119813 856 ntBASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Psmb5-202ENSMUST00000227257 622 ntBASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx27Q3UHD6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Snx27Q3UHD6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms