Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.28□□□□□ -0.28
Trim63Q38HM4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.28□□□□□ -0.28
Trim63Q38HM4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim63Q38HM4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.27□□□□□ -0.28
Trim63Q38HM4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim63Q38HM4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim63Q38HM4 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.26□□□□□ -0.29
Trim63Q38HM4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Cap2-205ENSMUST00000225824 1634 ntBASIC13.26□□□□□ -0.29
Trim63Q38HM4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim63Q38HM4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms