Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Gm17661-201ENSMUST00000170317 270 ntBASIC14.19□□□□□ -0.14
Rab42Q0PD08 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rab42Q0PD08 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Gm12085-201ENSMUST00000119263 940 ntBASIC14.18□□□□□ -0.14
Rab42Q0PD08 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Gm10812-201ENSMUST00000099864 546 ntBASIC14.18□□□□□ -0.14
Rab42Q0PD08 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.18□□□□□ -0.14
Rab42Q0PD08 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab42Q0PD08 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.17□□□□□ -0.14
Rab42Q0PD08 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.17□□□□□ -0.14
Rab42Q0PD08 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Gm27011-201ENSMUST00000182352 972 ntBASIC14.17□□□□□ -0.14
Rab42Q0PD08 Gm38027-201ENSMUST00000192315 235 ntBASIC14.17□□□□□ -0.14
Rab42Q0PD08 Timm23-208ENSMUST00000226683 750 ntBASIC14.17□□□□□ -0.14
Rab42Q0PD08 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.17□□□□□ -0.14
Rab42Q0PD08 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.17□□□□□ -0.14
Rab42Q0PD08 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.16□□□□□ -0.14
Rab42Q0PD08 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms