Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Gm25406-201ENSMUST00000157599 105 ntBASIC15.71■□□□□ 0.11
Sox4Q06831 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Gm7506-201ENSMUST00000207758 815 ntBASIC15.71■□□□□ 0.11
Sox4Q06831 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.71■□□□□ 0.11
Sox4Q06831 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sox4Q06831 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox4Q06831 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox4Q06831 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Sox4Q06831 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Sox4Q06831 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.71■□□□□ 0.1
Sox4Q06831 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox4Q06831 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox4Q06831 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox4Q06831 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.7■□□□□ 0.1
Sox4Q06831 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.7■□□□□ 0.1
Sox4Q06831 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.7■□□□□ 0.1
Sox4Q06831 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Sox4Q06831 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sox4Q06831 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sox4Q06831 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sox4Q06831 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox4Q06831 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox4Q06831 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sox4Q06831 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.69■□□□□ 0.1
Sox4Q06831 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.69■□□□□ 0.1
Sox4Q06831 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.69■□□□□ 0.1
Sox4Q06831 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.69■□□□□ 0.1
Sox4Q06831 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.69■□□□□ 0.1
Sox4Q06831 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.69■□□□□ 0.1
Sox4Q06831 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.69■□□□□ 0.1
Sox4Q06831 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.69■□□□□ 0.1
Sox4Q06831 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sox4Q06831 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.69■□□□□ 0.1
Sox4Q06831 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sox4Q06831 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.69■□□□□ 0.1
Sox4Q06831 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sox4Q06831 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox4Q06831 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox4Q06831 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sox4Q06831 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Sox4Q06831 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox4Q06831 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Sox4Q06831 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.68■□□□□ 0.1
Sox4Q06831 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sox4Q06831 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.68■□□□□ 0.1
Sox4Q06831 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.68■□□□□ 0.1
Sox4Q06831 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox4Q06831 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms