Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
Thbs3Q05895 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.06□□□□□ -0.16
Thbs3Q05895 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Thbs3Q05895 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thbs3Q05895 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.05□□□□□ -0.16
Thbs3Q05895 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Thbs3Q05895 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.05□□□□□ -0.16
Thbs3Q05895 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Gm27357-201ENSMUST00000183754 135 ntBASIC14.05□□□□□ -0.16
Thbs3Q05895 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.05□□□□□ -0.16
Thbs3Q05895 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Thbs3Q05895 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Thbs3Q05895 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Thbs3Q05895 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Thbs3Q05895 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thbs3Q05895 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.04□□□□□ -0.16
Thbs3Q05895 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Thbs3Q05895 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs3Q05895 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Thbs3Q05895 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Thbs3Q05895 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.03□□□□□ -0.16
Thbs3Q05895 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.03□□□□□ -0.16
Thbs3Q05895 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Thbs3Q05895 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.03□□□□□ -0.16
Thbs3Q05895 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs3Q05895 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Thbs3Q05895 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs3Q05895 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms