Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Gm26308-201ENSMUST00000157768 69 ntBASIC20.08■□□□□ 0.81
Nkx2-3P97334 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx2-3P97334 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nkx2-3P97334 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx2-3P97334 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx2-3P97334 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.08■□□□□ 0.8
Nkx2-3P97334 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx2-3P97334 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx2-3P97334 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx2-3P97334 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx2-3P97334 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx2-3P97334 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.07■□□□□ 0.8
Nkx2-3P97334 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx2-3P97334 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.06■□□□□ 0.8
Nkx2-3P97334 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Nkx2-3P97334 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.06■□□□□ 0.8
Nkx2-3P97334 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.06■□□□□ 0.8
Nkx2-3P97334 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Haglr-201ENSMUST00000100000 2085 ntBASIC20.06■□□□□ 0.8
Nkx2-3P97334 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx2-3P97334 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.05■□□□□ 0.8
Nkx2-3P97334 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-3P97334 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-3P97334 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Nkx2-3P97334 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-3P97334 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-3P97334 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-3P97334 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-3P97334 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx2-3P97334 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Gm18489-201ENSMUST00000172565 551 ntBASIC20.04■□□□□ 0.8
Nkx2-3P97334 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nkx2-3P97334 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nkx2-3P97334 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Gm19164-201ENSMUST00000210667 640 ntBASIC20.03■□□□□ 0.8
Nkx2-3P97334 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx2-3P97334 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms