Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.23■□□□□ 0.19
Cdh6P97326 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.23■□□□□ 0.19
Cdh6P97326 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Cdh6P97326 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Cdh6P97326 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Cdh6P97326 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.23■□□□□ 0.19
Cdh6P97326 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.23■□□□□ 0.19
Cdh6P97326 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdh6P97326 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cdh6P97326 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.22■□□□□ 0.19
Cdh6P97326 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdh6P97326 Ank2-226ENSMUST00000189368 339 ntBASIC16.22■□□□□ 0.19
Cdh6P97326 Gm18669-201ENSMUST00000216049 778 ntBASIC16.22■□□□□ 0.19
Cdh6P97326 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.22■□□□□ 0.19
Cdh6P97326 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Cdh6P97326 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.22■□□□□ 0.19
Cdh6P97326 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdh6P97326 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdh6P97326 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cdh6P97326 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh6P97326 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cdh6P97326 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.21■□□□□ 0.19
Cdh6P97326 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.21■□□□□ 0.19
Cdh6P97326 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cdh6P97326 Gm15372-201ENSMUST00000120729 834 ntBASIC16.21■□□□□ 0.19
Cdh6P97326 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdh6P97326 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh6P97326 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.21■□□□□ 0.19
Cdh6P97326 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cdh6P97326 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh6P97326 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh6P97326 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh6P97326 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.21■□□□□ 0.19
Cdh6P97326 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh6P97326 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdh6P97326 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdh6P97326 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.21■□□□□ 0.18
Cdh6P97326 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh6P97326 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdh6P97326 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Cdh6P97326 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cdh6P97326 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.2■□□□□ 0.18
Cdh6P97326 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Cdh6P97326 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.2■□□□□ 0.18
Cdh6P97326 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.2■□□□□ 0.18
Cdh6P97326 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh6P97326 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh6P97326 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Cdh6P97326 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cdh6P97326 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cdh6P97326 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdh6P97326 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh6P97326 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh6P97326 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh6P97326 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.19■□□□□ 0.18
Cdh6P97326 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdh6P97326 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cdh6P97326 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cdh6P97326 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Cdh6P97326 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh6P97326 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cdh6P97326 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.19■□□□□ 0.18
Cdh6P97326 Gm15165-201ENSMUST00000118140 502 ntBASIC16.19■□□□□ 0.18
Cdh6P97326 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms