Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H3f3aP84244 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
H3f3aP84244 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H3f3aP84244 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H3f3aP84244 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
H3f3aP84244 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
H3f3aP84244 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H3f3aP84244 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.24□□□□□ -0.13
H3f3aP84244 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H3f3aP84244 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.24□□□□□ -0.13
H3f3aP84244 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.24□□□□□ -0.13
H3f3aP84244 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.24□□□□□ -0.13
H3f3aP84244 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.24□□□□□ -0.13
H3f3aP84244 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
H3f3aP84244 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.24□□□□□ -0.13
H3f3aP84244 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
H3f3aP84244 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.24□□□□□ -0.13
H3f3aP84244 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H3f3aP84244 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.23□□□□□ -0.13
H3f3aP84244 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.23□□□□□ -0.13
H3f3aP84244 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
H3f3aP84244 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
H3f3aP84244 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.23□□□□□ -0.13
H3f3aP84244 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.23□□□□□ -0.13
H3f3aP84244 Gm28033-201ENSMUST00000184224 96 ntBASIC14.23□□□□□ -0.13
H3f3aP84244 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H3f3aP84244 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H3f3aP84244 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
H3f3aP84244 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H3f3aP84244 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H3f3aP84244 Gm9103-201ENSMUST00000119371 405 ntBASIC14.22□□□□□ -0.13
H3f3aP84244 Gm12895-201ENSMUST00000122214 226 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms