Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.7■□□□□ 0.1
Lhx1P63006 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.7■□□□□ 0.1
Lhx1P63006 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.7■□□□□ 0.1
Lhx1P63006 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
Lhx1P63006 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx1P63006 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Lhx1P63006 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx1P63006 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx1P63006 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx1P63006 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx1P63006 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lhx1P63006 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.69■□□□□ 0.1
Lhx1P63006 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Lhx1P63006 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lhx1P63006 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lhx1P63006 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Lhx1P63006 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.69■□□□□ 0.1
Lhx1P63006 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Lhx1P63006 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.69■□□□□ 0.1
Lhx1P63006 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Lhx1P63006 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.69■□□□□ 0.1
Lhx1P63006 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lhx1P63006 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Lhx1P63006 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Lhx1P63006 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Gm6257-201ENSMUST00000163864 910 ntBASIC15.68■□□□□ 0.1
Lhx1P63006 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.68■□□□□ 0.1
Lhx1P63006 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.68■□□□□ 0.1
Lhx1P63006 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.68■□□□□ 0.1
Lhx1P63006 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lhx1P63006 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lhx1P63006 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Lhx1P63006 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lhx1P63006 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Lhx1P63006 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.68■□□□□ 0.1
Lhx1P63006 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lhx1P63006 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lhx1P63006 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.67■□□□□ 0.1
Lhx1P63006 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.67■□□□□ 0.1
Lhx1P63006 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.67■□□□□ 0.1
Lhx1P63006 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lhx1P63006 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.67■□□□□ 0.1
Lhx1P63006 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.67■□□□□ 0.1
Lhx1P63006 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.67■□□□□ 0.1
Lhx1P63006 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lhx1P63006 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.67■□□□□ 0.1
Lhx1P63006 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Lhx1P63006 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.67■□□□□ 0.1
Lhx1P63006 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Lhx1P63006 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lhx1P63006 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lhx1P63006 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lhx1P63006 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms