Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpl39P62892 Gm7638-201ENSMUST00000121348 967 ntBASIC11.47□□□□□ -0.57
Rpl39P62892 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rpl39P62892 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.47□□□□□ -0.57
Rpl39P62892 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.47□□□□□ -0.57
Rpl39P62892 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Rpl39P62892 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.47□□□□□ -0.57
Rpl39P62892 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.47□□□□□ -0.57
Rpl39P62892 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rpl39P62892 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rpl39P62892 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rpl39P62892 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpl39P62892 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpl39P62892 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpl39P62892 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.47□□□□□ -0.57
Rpl39P62892 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpl39P62892 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpl39P62892 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rpl39P62892 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Rpl39P62892 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.46□□□□□ -0.57
Rpl39P62892 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rpl39P62892 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Rpl39P62892 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.46□□□□□ -0.57
Rpl39P62892 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.46□□□□□ -0.57
Rpl39P62892 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.46□□□□□ -0.57
Rpl39P62892 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rpl39P62892 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rpl39P62892 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rpl39P62892 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rpl39P62892 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC11.46□□□□□ -0.58
Rpl39P62892 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rpl39P62892 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Rpl39P62892 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rpl39P62892 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Rpl39P62892 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rpl39P62892 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rpl39P62892 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rpl39P62892 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Rpl39P62892 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rpl39P62892 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Rpl39P62892 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rpl39P62892 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.45□□□□□ -0.58
Rpl39P62892 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.45□□□□□ -0.58
Rpl39P62892 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Gm18666-201ENSMUST00000190039 958 ntBASIC11.45□□□□□ -0.58
Rpl39P62892 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.45□□□□□ -0.58
Rpl39P62892 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Rpl39P62892 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rpl39P62892 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rpl39P62892 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Rpl39P62892 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Rpl39P62892 Actl10-202ENSMUST00000226583 1501 ntBASIC11.45□□□□□ -0.58
Rpl39P62892 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rpl39P62892 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.44□□□□□ -0.58
Rpl39P62892 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Rpl39P62892 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Rpl39P62892 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Rpl39P62892 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Rpl39P62892 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Rpl39P62892 Il3ra-202ENSMUST00000223589 738 ntBASIC11.44□□□□□ -0.58
Rpl39P62892 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Rpl39P62892 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Rpl39P62892 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Rpl39P62892 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms