Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.13□□□□□ -0.15
Sec61a1P61620 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Prob1-201ENSMUST00000097619 3021 ntBASIC14.13□□□□□ -0.15
Sec61a1P61620 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a1P61620 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sec61a1P61620 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Gm10013-201ENSMUST00000106074 672 ntBASIC14.12□□□□□ -0.15
Sec61a1P61620 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sec61a1P61620 Gm22697-201ENSMUST00000175194 63 ntBASIC14.12□□□□□ -0.15
Sec61a1P61620 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.12□□□□□ -0.15
Sec61a1P61620 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a1P61620 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.11□□□□□ -0.15
Sec61a1P61620 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.11□□□□□ -0.15
Sec61a1P61620 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sec61a1P61620 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Sec61a1P61620 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Gm18101-201ENSMUST00000215769 548 ntBASIC14.11□□□□□ -0.15
Sec61a1P61620 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.11□□□□□ -0.15
Sec61a1P61620 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.11□□□□□ -0.15
Sec61a1P61620 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sec61a1P61620 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a1P61620 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.11□□□□□ -0.15
Sec61a1P61620 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Sec61a1P61620 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sec61a1P61620 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sec61a1P61620 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sec61a1P61620 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms