Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Sf3b6P59708 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.23□□□□□ -0.13
Sf3b6P59708 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sf3b6P59708 Gm18115-201ENSMUST00000221209 621 ntBASIC14.23□□□□□ -0.13
Sf3b6P59708 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sf3b6P59708 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sf3b6P59708 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.23□□□□□ -0.13
Sf3b6P59708 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sf3b6P59708 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.22□□□□□ -0.13
Sf3b6P59708 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Sf3b6P59708 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Mir5122-201ENSMUST00000175004 89 ntBASIC14.22□□□□□ -0.13
Sf3b6P59708 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.22□□□□□ -0.13
Sf3b6P59708 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sf3b6P59708 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Sf3b6P59708 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b6P59708 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sf3b6P59708 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.21□□□□□ -0.13
Sf3b6P59708 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sf3b6P59708 Gm37055-201ENSMUST00000191866 133 ntBASIC14.21□□□□□ -0.13
Sf3b6P59708 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sf3b6P59708 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b6P59708 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sf3b6P59708 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3b6P59708 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3b6P59708 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3b6P59708 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3b6P59708 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.21□□□□□ -0.14
Sf3b6P59708 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.21□□□□□ -0.14
Sf3b6P59708 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sf3b6P59708 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3b6P59708 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Odf3b-204ENSMUST00000227834 930 ntBASIC14.2□□□□□ -0.14
Sf3b6P59708 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sf3b6P59708 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.2□□□□□ -0.14
Sf3b6P59708 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3b6P59708 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3b6P59708 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b6P59708 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms