Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tpm1P58771 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tpm1P58771 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tpm1P58771 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Tpm1P58771 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.89■□□□□ 0.45
Tpm1P58771 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.89■□□□□ 0.45
Tpm1P58771 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.89■□□□□ 0.45
Tpm1P58771 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.89■□□□□ 0.45
Tpm1P58771 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.89■□□□□ 0.45
Tpm1P58771 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.89■□□□□ 0.45
Tpm1P58771 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.89■□□□□ 0.45
Tpm1P58771 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.89■□□□□ 0.45
Tpm1P58771 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tpm1P58771 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tpm1P58771 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.88■□□□□ 0.45
Tpm1P58771 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Tpm1P58771 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Tpm1P58771 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.88■□□□□ 0.45
Tpm1P58771 Timm23-208ENSMUST00000226683 750 ntBASIC17.88■□□□□ 0.45
Tpm1P58771 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Tpm1P58771 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Tpm1P58771 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.88■□□□□ 0.45
Tpm1P58771 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Tpm1P58771 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.88■□□□□ 0.45
Tpm1P58771 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Tpm1P58771 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tpm1P58771 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tpm1P58771 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.87■□□□□ 0.45
Tpm1P58771 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tpm1P58771 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tpm1P58771 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tpm1P58771 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tpm1P58771 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Tpm1P58771 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Tpm1P58771 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Tpm1P58771 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Tpm1P58771 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tpm1P58771 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Tpm1P58771 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.86■□□□□ 0.45
Tpm1P58771 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Tpm1P58771 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tpm1P58771 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Tpm1P58771 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Tpm1P58771 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Gm12527-201ENSMUST00000117967 564 ntBASIC17.85■□□□□ 0.45
Tpm1P58771 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Tpm1P58771 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Tpm1P58771 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Tpm1P58771 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tpm1P58771 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tpm1P58771 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms