Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.97□□□□□ -0.33
Sssca1P56873 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sssca1P56873 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.97□□□□□ -0.33
Sssca1P56873 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.97□□□□□ -0.33
Sssca1P56873 Gm27463-201ENSMUST00000183569 57 ntBASIC12.97□□□□□ -0.33
Sssca1P56873 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.97□□□□□ -0.33
Sssca1P56873 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.97□□□□□ -0.33
Sssca1P56873 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.97□□□□□ -0.33
Sssca1P56873 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sssca1P56873 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.97□□□□□ -0.33
Sssca1P56873 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.97□□□□□ -0.33
Sssca1P56873 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sssca1P56873 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sssca1P56873 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sssca1P56873 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Sssca1P56873 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
Sssca1P56873 Gm20760-201ENSMUST00000179197 648 ntBASIC12.96□□□□□ -0.33
Sssca1P56873 Gm3375-201ENSMUST00000203929 796 ntBASIC12.96□□□□□ -0.33
Sssca1P56873 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Sssca1P56873 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.96□□□□□ -0.33
Sssca1P56873 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sssca1P56873 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sssca1P56873 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sssca1P56873 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sssca1P56873 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sssca1P56873 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sssca1P56873 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sssca1P56873 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Sssca1P56873 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sssca1P56873 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sssca1P56873 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sssca1P56873 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.95□□□□□ -0.34
Sssca1P56873 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.95□□□□□ -0.34
Sssca1P56873 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Sssca1P56873 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.95□□□□□ -0.34
Sssca1P56873 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Sssca1P56873 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Sssca1P56873 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sssca1P56873 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.95□□□□□ -0.34
Sssca1P56873 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sssca1P56873 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.94□□□□□ -0.34
Sssca1P56873 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sssca1P56873 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sssca1P56873 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms