Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.87■□□□□ 0.13
Atxn1P54254 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.87■□□□□ 0.13
Atxn1P54254 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.87■□□□□ 0.13
Atxn1P54254 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Atxn1P54254 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.87■□□□□ 0.13
Atxn1P54254 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Atxn1P54254 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.87■□□□□ 0.13
Atxn1P54254 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Atxn1P54254 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Atxn1P54254 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Atxn1P54254 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Atxn1P54254 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Atxn1P54254 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Atxn1P54254 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.86■□□□□ 0.13
Atxn1P54254 Gm44430-201ENSMUST00000203376 995 ntBASIC15.86■□□□□ 0.13
Atxn1P54254 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.86■□□□□ 0.13
Atxn1P54254 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.86■□□□□ 0.13
Atxn1P54254 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atxn1P54254 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.85■□□□□ 0.13
Atxn1P54254 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.85■□□□□ 0.13
Atxn1P54254 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.85■□□□□ 0.13
Atxn1P54254 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Atxn1P54254 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atxn1P54254 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.84■□□□□ 0.13
Atxn1P54254 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.84■□□□□ 0.13
Atxn1P54254 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.84■□□□□ 0.13
Atxn1P54254 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.84■□□□□ 0.13
Atxn1P54254 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atxn1P54254 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Atxn1P54254 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Atxn1P54254 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Atxn1P54254 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Atxn1P54254 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Atxn1P54254 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Atxn1P54254 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.83■□□□□ 0.12
Atxn1P54254 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.83■□□□□ 0.12
Atxn1P54254 Gm11025-201ENSMUST00000140773 466 ntBASIC15.83■□□□□ 0.12
Atxn1P54254 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.83■□□□□ 0.12
Atxn1P54254 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Atxn1P54254 Mir6956-201ENSMUST00000183598 62 ntBASIC15.83■□□□□ 0.12
Atxn1P54254 Mir8117-201ENSMUST00000184773 107 ntBASIC15.83■□□□□ 0.12
Atxn1P54254 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.83■□□□□ 0.12
Atxn1P54254 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.83■□□□□ 0.12
Atxn1P54254 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.83■□□□□ 0.12
Atxn1P54254 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.83■□□□□ 0.12
Atxn1P54254 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atxn1P54254 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms