Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Srp9P49962 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp9P49962 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Srp9P49962 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.65□□□□□ -0.22
Srp9P49962 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.65□□□□□ -0.22
Srp9P49962 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.65□□□□□ -0.22
Srp9P49962 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.65□□□□□ -0.22
Srp9P49962 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Srp9P49962 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp9P49962 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Srp9P49962 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Srp9P49962 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
Srp9P49962 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Srp9P49962 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.64□□□□□ -0.23
Srp9P49962 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Srp9P49962 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.64□□□□□ -0.23
Srp9P49962 Gm2274-201ENSMUST00000184539 609 ntBASIC13.64□□□□□ -0.23
Srp9P49962 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
Srp9P49962 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Srp9P49962 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Srp9P49962 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Srp9P49962 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.63□□□□□ -0.23
Srp9P49962 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Srp9P49962 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Srp9P49962 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Srp9P49962 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Srp9P49962 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Srp9P49962 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Srp9P49962 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Srp9P49962 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Srp9P49962 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms