Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sdc2P43407 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.98■□□□□ 0.47
Sdc2P43407 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sdc2P43407 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sdc2P43407 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.98■□□□□ 0.47
Sdc2P43407 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.98■□□□□ 0.47
Sdc2P43407 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sdc2P43407 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sdc2P43407 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.98■□□□□ 0.47
Sdc2P43407 Mir6982-201ENSMUST00000184354 68 ntBASIC17.98■□□□□ 0.47
Sdc2P43407 Gm10252-201ENSMUST00000209541 832 ntBASIC17.98■□□□□ 0.47
Sdc2P43407 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.98■□□□□ 0.47
Sdc2P43407 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sdc2P43407 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sdc2P43407 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sdc2P43407 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.97■□□□□ 0.47
Sdc2P43407 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.97■□□□□ 0.47
Sdc2P43407 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Sdc2P43407 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Sdc2P43407 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sdc2P43407 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.97■□□□□ 0.47
Sdc2P43407 Gm22697-201ENSMUST00000175194 63 ntBASIC17.97■□□□□ 0.47
Sdc2P43407 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Sdc2P43407 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 App-207ENSMUST00000227737 2827 ntBASIC17.97■□□□□ 0.47
Sdc2P43407 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sdc2P43407 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sdc2P43407 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.96■□□□□ 0.47
Sdc2P43407 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.96■□□□□ 0.47
Sdc2P43407 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Sdc2P43407 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Sdc2P43407 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sdc2P43407 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Sdc2P43407 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Sdc2P43407 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Gm6433-201ENSMUST00000118634 875 ntBASIC17.95■□□□□ 0.46
Sdc2P43407 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.95■□□□□ 0.46
Sdc2P43407 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sdc2P43407 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.95■□□□□ 0.46
Sdc2P43407 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Sdc2P43407 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Sdc2P43407 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sdc2P43407 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sdc2P43407 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc2P43407 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sdc2P43407 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms