Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmx3P42581 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Hmx3P42581 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmx3P42581 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmx3P42581 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmx3P42581 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Hmx3P42581 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmx3P42581 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmx3P42581 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmx3P42581 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmx3P42581 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmx3P42581 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmx3P42581 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.42□□□□□ -0.26
Hmx3P42581 Gm13168-201ENSMUST00000121771 632 ntBASIC13.42□□□□□ -0.26
Hmx3P42581 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.42□□□□□ -0.26
Hmx3P42581 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.42□□□□□ -0.26
Hmx3P42581 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Hmx3P42581 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.42□□□□□ -0.26
Hmx3P42581 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmx3P42581 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmx3P42581 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Hmx3P42581 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Hmx3P42581 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Gm24841-201ENSMUST00000158676 357 ntBASIC13.4□□□□□ -0.26
Hmx3P42581 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.4□□□□□ -0.26
Hmx3P42581 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hmx3P42581 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Hmx3P42581 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.39□□□□□ -0.27
Hmx3P42581 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.39□□□□□ -0.27
Hmx3P42581 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.39□□□□□ -0.27
Hmx3P42581 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.39□□□□□ -0.27
Hmx3P42581 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hmx3P42581 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hmx3P42581 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hmx3P42581 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.38□□□□□ -0.27
Hmx3P42581 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hmx3P42581 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms