Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.82□□□□□ -0.36
Cd27P41272 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cd27P41272 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd27P41272 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cd27P41272 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cd27P41272 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.81□□□□□ -0.36
Cd27P41272 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cd27P41272 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd27P41272 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Cd27P41272 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cd27P41272 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cd27P41272 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cd27P41272 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.8□□□□□ -0.36
Cd27P41272 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.8□□□□□ -0.36
Cd27P41272 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.8□□□□□ -0.36
Cd27P41272 Gm34391-201ENSMUST00000203706 907 ntBASIC12.8□□□□□ -0.36
Cd27P41272 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.8□□□□□ -0.36
Cd27P41272 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.8□□□□□ -0.36
Cd27P41272 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cd27P41272 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.8□□□□□ -0.36
Cd27P41272 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cd27P41272 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.8□□□□□ -0.36
Cd27P41272 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.8□□□□□ -0.36
Cd27P41272 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.8□□□□□ -0.36
Cd27P41272 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cd27P41272 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.79□□□□□ -0.36
Cd27P41272 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.79□□□□□ -0.36
Cd27P41272 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cd27P41272 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.79□□□□□ -0.36
Cd27P41272 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.79□□□□□ -0.36
Cd27P41272 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.79□□□□□ -0.36
Cd27P41272 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.79□□□□□ -0.36
Cd27P41272 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cd27P41272 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cd27P41272 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.79□□□□□ -0.36
Cd27P41272 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cd27P41272 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.79□□□□□ -0.36
Cd27P41272 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cd27P41272 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cd27P41272 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Cd27P41272 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms