Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.3□□□□□ -0.28
Abca1P41233 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Abca1P41233 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Abca1P41233 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Abca1P41233 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Abca1P41233 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Gm14494-201ENSMUST00000118786 435 ntBASIC13.29□□□□□ -0.28
Abca1P41233 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Sybu-209ENSMUST00000228639 4113 ntBASIC13.29□□□□□ -0.28
Abca1P41233 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.29□□□□□ -0.28
Abca1P41233 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Abca1P41233 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.29□□□□□ -0.28
Abca1P41233 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.29□□□□□ -0.28
Abca1P41233 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.29□□□□□ -0.28
Abca1P41233 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Abca1P41233 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Abca1P41233 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.28□□□□□ -0.28
Abca1P41233 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Abca1P41233 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Gm9727-201ENSMUST00000161387 555 ntBASIC13.28□□□□□ -0.28
Abca1P41233 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.28□□□□□ -0.28
Abca1P41233 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Abca1P41233 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Gm14140-201ENSMUST00000119999 995 ntBASIC13.28□□□□□ -0.28
Abca1P41233 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Abca1P41233 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.28□□□□□ -0.28
Abca1P41233 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Abca1P41233 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Abca1P41233 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Abca1P41233 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Abca1P41233 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Abca1P41233 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Abca1P41233 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Abca1P41233 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Abca1P41233 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.27□□□□□ -0.28
Abca1P41233 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Abca1P41233 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Abca1P41233 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Abca1P41233 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Abca1P41233 Gm15173-201ENSMUST00000122049 433 ntBASIC13.27□□□□□ -0.28
Abca1P41233 Gm14822-201ENSMUST00000122247 291 ntBASIC13.27□□□□□ -0.28
Abca1P41233 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Abca1P41233 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.27□□□□□ -0.28
Abca1P41233 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.27□□□□□ -0.28
Abca1P41233 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Abca1P41233 Auts2-212ENSMUST00000178555 309 ntBASIC13.27□□□□□ -0.28
Abca1P41233 Gm6550-201ENSMUST00000187574 993 ntBASIC13.27□□□□□ -0.28
Abca1P41233 Gm7506-201ENSMUST00000207758 815 ntBASIC13.27□□□□□ -0.28
Abca1P41233 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Abca1P41233 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Abca1P41233 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Abca1P41233 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Abca1P41233 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms