Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Sox6P40645 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.07■□□□□ 0
Sox6P40645 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Sox6P40645 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.07■□□□□ 0
Sox6P40645 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.07■□□□□ 0
Sox6P40645 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox6P40645 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sox6P40645 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sox6P40645 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.06■□□□□ 0
Sox6P40645 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.06■□□□□ 0
Sox6P40645 Gm13836-201ENSMUST00000121159 501 ntBASIC15.06■□□□□ 0
Sox6P40645 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.06■□□□□ 0
Sox6P40645 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox6P40645 Gm7213-201ENSMUST00000215977 950 ntBASIC15.06■□□□□ 0
Sox6P40645 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.06■□□□□ 0
Sox6P40645 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.06■□□□□ 0
Sox6P40645 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox6P40645 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Sox6P40645 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Sox6P40645 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox6P40645 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sox6P40645 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox6P40645 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sox6P40645 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Sox6P40645 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox6P40645 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox6P40645 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox6P40645 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox6P40645 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Sox6P40645 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sox6P40645 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Sox6P40645 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.05■□□□□ -0
Sox6P40645 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.05■□□□□ -0
Sox6P40645 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.05■□□□□ -0
Sox6P40645 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.05■□□□□ -0
Sox6P40645 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.05■□□□□ -0
Sox6P40645 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sox6P40645 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sox6P40645 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.05■□□□□ -0
Sox6P40645 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Sox6P40645 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox6P40645 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox6P40645 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox6P40645 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox6P40645 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.04■□□□□ -0
Sox6P40645 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox6P40645 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox6P40645 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sox6P40645 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox6P40645 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms