Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.06□□□□□ -0.16
Upk2P38575 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Upk2P38575 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Upk2P38575 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Upk2P38575 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Upk2P38575 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.06□□□□□ -0.16
Upk2P38575 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Upk2P38575 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.06□□□□□ -0.16
Upk2P38575 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Upk2P38575 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Upk2P38575 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.05□□□□□ -0.16
Upk2P38575 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.05□□□□□ -0.16
Upk2P38575 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk2P38575 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.04□□□□□ -0.16
Upk2P38575 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.04□□□□□ -0.16
Upk2P38575 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.04□□□□□ -0.16
Upk2P38575 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Upk2P38575 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.04□□□□□ -0.16
Upk2P38575 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Upk2P38575 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Upk2P38575 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.04□□□□□ -0.16
Upk2P38575 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.04□□□□□ -0.16
Upk2P38575 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Upk2P38575 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk2P38575 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.03□□□□□ -0.16
Upk2P38575 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.03□□□□□ -0.16
Upk2P38575 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.03□□□□□ -0.16
Upk2P38575 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.03□□□□□ -0.16
Upk2P38575 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.03□□□□□ -0.16
Upk2P38575 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.03□□□□□ -0.16
Upk2P38575 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk2P38575 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Upk2P38575 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Upk2P38575 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk2P38575 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Upk2P38575 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms