Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Mmp3P28862 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mmp3P28862 Gm11594-201ENSMUST00000122313 162 ntBASIC17.1■□□□□ 0.33
Mmp3P28862 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Gm5264-201ENSMUST00000190584 848 ntBASIC17.1■□□□□ 0.33
Mmp3P28862 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.1■□□□□ 0.33
Mmp3P28862 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Mmp3P28862 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Mmp3P28862 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Gm8344-201ENSMUST00000119813 856 ntBASIC17.09■□□□□ 0.33
Mmp3P28862 Gm15467-201ENSMUST00000120582 445 ntBASIC17.09■□□□□ 0.33
Mmp3P28862 Gm12260-201ENSMUST00000122447 411 ntBASIC17.09■□□□□ 0.33
Mmp3P28862 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.09■□□□□ 0.33
Mmp3P28862 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.09■□□□□ 0.33
Mmp3P28862 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.09■□□□□ 0.33
Mmp3P28862 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.09■□□□□ 0.33
Mmp3P28862 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.09■□□□□ 0.33
Mmp3P28862 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Mmp3P28862 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Mmp3P28862 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mmp3P28862 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp3P28862 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp3P28862 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mmp3P28862 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.08■□□□□ 0.32
Mmp3P28862 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Gm6257-201ENSMUST00000163864 910 ntBASIC17.08■□□□□ 0.32
Mmp3P28862 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Mmp3P28862 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.08■□□□□ 0.32
Mmp3P28862 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mmp3P28862 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp3P28862 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.07■□□□□ 0.32
Mmp3P28862 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Mmp3P28862 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp3P28862 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Mmp3P28862 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp3P28862 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.07■□□□□ 0.32
Mmp3P28862 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Mmp3P28862 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Mmp3P28862 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Mmp3P28862 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mmp3P28862 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mmp3P28862 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms