Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CenpbP27790 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CenpbP27790 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CenpbP27790 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CenpbP27790 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.64■■□□□ 1.05
CenpbP27790 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CenpbP27790 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CenpbP27790 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CenpbP27790 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.63■■□□□ 1.05
CenpbP27790 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CenpbP27790 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CenpbP27790 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CenpbP27790 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CenpbP27790 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.63■■□□□ 1.05
CenpbP27790 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CenpbP27790 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CenpbP27790 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CenpbP27790 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CenpbP27790 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Gm29257-201ENSMUST00000186115 639 ntBASIC21.62■■□□□ 1.05
CenpbP27790 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.62■■□□□ 1.05
CenpbP27790 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
CenpbP27790 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CenpbP27790 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CenpbP27790 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CenpbP27790 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.61■■□□□ 1.05
CenpbP27790 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CenpbP27790 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CenpbP27790 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.61■■□□□ 1.05
CenpbP27790 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CenpbP27790 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.6■■□□□ 1.05
CenpbP27790 Mir5133-201ENSMUST00000174955 77 ntBASIC21.6■■□□□ 1.05
CenpbP27790 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CenpbP27790 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.6■■□□□ 1.05
CenpbP27790 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CenpbP27790 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms