Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nfkb1P25799 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Nfkb1P25799 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.41■□□□□ 0.22
Nfkb1P25799 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.41■□□□□ 0.22
Nfkb1P25799 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Nfkb1P25799 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nfkb1P25799 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Nfkb1P25799 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nfkb1P25799 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nfkb1P25799 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Gm12350-201ENSMUST00000121208 462 ntBASIC16.4■□□□□ 0.22
Nfkb1P25799 Gm15173-201ENSMUST00000122049 433 ntBASIC16.4■□□□□ 0.22
Nfkb1P25799 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nfkb1P25799 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Nfkb1P25799 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.4■□□□□ 0.22
Nfkb1P25799 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nfkb1P25799 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nfkb1P25799 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nfkb1P25799 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nfkb1P25799 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nfkb1P25799 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Nfkb1P25799 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nfkb1P25799 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Gm7230-201ENSMUST00000173026 815 ntBASIC16.39■□□□□ 0.21
Nfkb1P25799 Gm27525-201ENSMUST00000184465 107 ntBASIC16.39■□□□□ 0.21
Nfkb1P25799 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.39■□□□□ 0.21
Nfkb1P25799 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.39■□□□□ 0.21
Nfkb1P25799 Gm8655-201ENSMUST00000221159 852 ntBASIC16.39■□□□□ 0.21
Nfkb1P25799 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nfkb1P25799 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Nfkb1P25799 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.39■□□□□ 0.21
Nfkb1P25799 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nfkb1P25799 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nfkb1P25799 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Gm11780-201ENSMUST00000136880 516 ntBASIC16.38■□□□□ 0.21
Nfkb1P25799 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.38■□□□□ 0.21
Nfkb1P25799 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nfkb1P25799 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.38■□□□□ 0.21
Nfkb1P25799 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nfkb1P25799 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nfkb1P25799 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nfkb1P25799 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nfkb1P25799 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nfkb1P25799 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nfkb1P25799 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nfkb1P25799 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms