Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Gm15165-201ENSMUST00000118140 502 ntBASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Gm27867-201ENSMUST00000184778 125 ntBASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tnfrsf1bP25119 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tnfrsf1bP25119 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Gm15372-201ENSMUST00000120729 834 ntBASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.8□□□□□ -0.04
Tnfrsf1bP25119 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfrsf1bP25119 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms