Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga1P17095 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.32■□□□□ 0.2
Hmga1P17095 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga1P17095 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga1P17095 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga1P17095 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.32■□□□□ 0.2
Hmga1P17095 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.32■□□□□ 0.2
Hmga1P17095 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmga1P17095 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmga1P17095 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmga1P17095 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hmga1P17095 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmga1P17095 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmga1P17095 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Hmga1P17095 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.31■□□□□ 0.2
Hmga1P17095 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.31■□□□□ 0.2
Hmga1P17095 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.31■□□□□ 0.2
Hmga1P17095 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmga1P17095 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmga1P17095 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hmga1P17095 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmga1P17095 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hmga1P17095 Gm15358-201ENSMUST00000119249 520 ntBASIC16.3■□□□□ 0.2
Hmga1P17095 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.3■□□□□ 0.2
Hmga1P17095 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.3■□□□□ 0.2
Hmga1P17095 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.3■□□□□ 0.2
Hmga1P17095 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmga1P17095 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.3■□□□□ 0.2
Hmga1P17095 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.3■□□□□ 0.2
Hmga1P17095 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.3■□□□□ 0.2
Hmga1P17095 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmga1P17095 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmga1P17095 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.29■□□□□ 0.2
Hmga1P17095 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hmga1P17095 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Gm14140-201ENSMUST00000119999 995 ntBASIC16.29■□□□□ 0.2
Hmga1P17095 Gm11764-201ENSMUST00000120221 623 ntBASIC16.29■□□□□ 0.2
Hmga1P17095 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.29■□□□□ 0.2
Hmga1P17095 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Hmga1P17095 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.29■□□□□ 0.2
Hmga1P17095 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.29■□□□□ 0.2
Hmga1P17095 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.29■□□□□ 0.2
Hmga1P17095 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hmga1P17095 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Hmga1P17095 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hmga1P17095 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hmga1P17095 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga1P17095 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hmga1P17095 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga1P17095 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga1P17095 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga1P17095 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga1P17095 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga1P17095 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hmga1P17095 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms