Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.36■□□□□ 0.21
Rb1P13405 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Gm11452-201ENSMUST00000122376 690 ntBASIC16.36■□□□□ 0.21
Rb1P13405 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.36■□□□□ 0.21
Rb1P13405 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.36■□□□□ 0.21
Rb1P13405 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.36■□□□□ 0.21
Rb1P13405 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.36■□□□□ 0.21
Rb1P13405 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.36■□□□□ 0.21
Rb1P13405 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Rb1P13405 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rb1P13405 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.36■□□□□ 0.21
Rb1P13405 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rb1P13405 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.35■□□□□ 0.21
Rb1P13405 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Rb1P13405 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rb1P13405 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.35■□□□□ 0.21
Rb1P13405 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rb1P13405 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rb1P13405 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.34■□□□□ 0.21
Rb1P13405 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.34■□□□□ 0.21
Rb1P13405 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rb1P13405 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.34■□□□□ 0.21
Rb1P13405 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Phf7-203ENSMUST00000226565 1971 ntBASIC16.34■□□□□ 0.21
Rb1P13405 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rb1P13405 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rb1P13405 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.34■□□□□ 0.21
Rb1P13405 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rb1P13405 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rb1P13405 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Gm13312-201ENSMUST00000119631 718 ntBASIC16.33■□□□□ 0.2
Rb1P13405 Gm12644-201ENSMUST00000119935 606 ntBASIC16.33■□□□□ 0.2
Rb1P13405 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.33■□□□□ 0.2
Rb1P13405 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.33■□□□□ 0.2
Rb1P13405 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rb1P13405 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rb1P13405 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms