Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl1P12850 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.28□□□□□ -0.28
Cxcl1P12850 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cxcl1P12850 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Gm13168-201ENSMUST00000121771 632 ntBASIC13.28□□□□□ -0.28
Cxcl1P12850 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.28□□□□□ -0.28
Cxcl1P12850 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl1P12850 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl1P12850 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.27□□□□□ -0.28
Cxcl1P12850 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cxcl1P12850 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl1P12850 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.27□□□□□ -0.29
Cxcl1P12850 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Cxcl1P12850 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl1P12850 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl1P12850 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl1P12850 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.26□□□□□ -0.29
Cxcl1P12850 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.26□□□□□ -0.29
Cxcl1P12850 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cxcl1P12850 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cxcl1P12850 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl1P12850 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cxcl1P12850 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.25□□□□□ -0.29
Cxcl1P12850 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cxcl1P12850 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms