Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Hoxc6P10629 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxc6P10629 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxc6P10629 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hoxc6P10629 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.71■□□□□ 0.43
Hoxc6P10629 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hoxc6P10629 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.71■□□□□ 0.43
Hoxc6P10629 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hoxc6P10629 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Hoxc6P10629 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hoxc6P10629 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hoxc6P10629 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Hoxc6P10629 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Hoxc6P10629 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.7■□□□□ 0.42
Hoxc6P10629 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Gm14701-201ENSMUST00000117156 348 ntBASIC17.7■□□□□ 0.42
Hoxc6P10629 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.7■□□□□ 0.42
Hoxc6P10629 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.7■□□□□ 0.42
Hoxc6P10629 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hoxc6P10629 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.7■□□□□ 0.42
Hoxc6P10629 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.69■□□□□ 0.42
Hoxc6P10629 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.69■□□□□ 0.42
Hoxc6P10629 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.69■□□□□ 0.42
Hoxc6P10629 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxc6P10629 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.68■□□□□ 0.42
Hoxc6P10629 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxc6P10629 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxc6P10629 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hoxc6P10629 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Gm44872-201ENSMUST00000207864 420 ntBASIC17.68■□□□□ 0.42
Hoxc6P10629 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Hoxc6P10629 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hoxc6P10629 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxc6P10629 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxc6P10629 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Hoxc6P10629 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hoxc6P10629 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms