Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.95□□□□□ -0.18
UbbP0CG49 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.95□□□□□ -0.18
UbbP0CG49 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.95□□□□□ -0.18
UbbP0CG49 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UbbP0CG49 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
UbbP0CG49 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UbbP0CG49 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
UbbP0CG49 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
UbbP0CG49 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.94□□□□□ -0.18
UbbP0CG49 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UbbP0CG49 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
UbbP0CG49 Gm11539-201ENSMUST00000119837 557 ntBASIC13.94□□□□□ -0.18
UbbP0CG49 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.94□□□□□ -0.18
UbbP0CG49 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
UbbP0CG49 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.94□□□□□ -0.18
UbbP0CG49 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UbbP0CG49 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
UbbP0CG49 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
UbbP0CG49 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.93□□□□□ -0.18
UbbP0CG49 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
UbbP0CG49 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
UbbP0CG49 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.93□□□□□ -0.18
UbbP0CG49 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Gm36967-201ENSMUST00000193814 266 ntBASIC13.93□□□□□ -0.18
UbbP0CG49 Gm44450-201ENSMUST00000199528 114 ntBASIC13.93□□□□□ -0.18
UbbP0CG49 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
UbbP0CG49 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.93□□□□□ -0.18
UbbP0CG49 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.93□□□□□ -0.18
UbbP0CG49 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
UbbP0CG49 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UbbP0CG49 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UbbP0CG49 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UbbP0CG49 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.92□□□□□ -0.18
UbbP0CG49 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UbbP0CG49 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
UbbP0CG49 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.92□□□□□ -0.18
UbbP0CG49 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.92□□□□□ -0.18
UbbP0CG49 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UbbP0CG49 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UbbP0CG49 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms