Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NeflP08551 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NeflP08551 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NeflP08551 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.85■□□□□ 0.93
NeflP08551 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.85■□□□□ 0.93
NeflP08551 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
NeflP08551 Gm45212-201ENSMUST00000205831 3403 ntBASIC20.85■□□□□ 0.93
NeflP08551 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Gm18115-201ENSMUST00000221209 621 ntBASIC20.85■□□□□ 0.93
NeflP08551 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
NeflP08551 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NeflP08551 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.85■□□□□ 0.93
NeflP08551 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
NeflP08551 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
NeflP08551 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.84■□□□□ 0.93
NeflP08551 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Gm27463-201ENSMUST00000183569 57 ntBASIC20.84■□□□□ 0.93
NeflP08551 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NeflP08551 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NeflP08551 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NeflP08551 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.84■□□□□ 0.93
NeflP08551 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.84■□□□□ 0.93
NeflP08551 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
NeflP08551 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.83■□□□□ 0.93
NeflP08551 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.83■□□□□ 0.93
NeflP08551 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NeflP08551 Gm20760-201ENSMUST00000179197 648 ntBASIC20.83■□□□□ 0.93
NeflP08551 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.83■□□□□ 0.93
NeflP08551 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NeflP08551 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NeflP08551 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NeflP08551 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NeflP08551 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NeflP08551 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.83■□□□□ 0.92
NeflP08551 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NeflP08551 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NeflP08551 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
NeflP08551 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NeflP08551 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NeflP08551 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NeflP08551 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC20.82■□□□□ 0.92
NeflP08551 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NeflP08551 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.82■□□□□ 0.92
NeflP08551 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.82■□□□□ 0.92
NeflP08551 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.82■□□□□ 0.92
NeflP08551 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NeflP08551 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.81■□□□□ 0.92
NeflP08551 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NeflP08551 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC20.81■□□□□ 0.92
NeflP08551 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
NeflP08551 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NeflP08551 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.81■□□□□ 0.92
NeflP08551 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
NeflP08551 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.81■□□□□ 0.92
NeflP08551 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms