Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.74□□□□□ -0.53
P06328 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.74□□□□□ -0.53
P06328 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
P06328 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P06328 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P06328 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P06328 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
P06328 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P06328 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P06328 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P06328 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Gm13559-201ENSMUST00000120476 863 ntBASIC11.73□□□□□ -0.53
P06328 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.73□□□□□ -0.53
P06328 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Mir5130-201ENSMUST00000175160 84 ntBASIC11.73□□□□□ -0.53
P06328 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.73□□□□□ -0.53
P06328 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.73□□□□□ -0.53
P06328 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.73□□□□□ -0.53
P06328 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P06328 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
P06328 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P06328 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.72□□□□□ -0.53
P06328 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
P06328 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.72□□□□□ -0.53
P06328 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.72□□□□□ -0.53
P06328 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.72□□□□□ -0.53
P06328 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06328 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06328 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06328 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06328 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06328 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06328 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06328 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms