Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.1□□□□□ -0.15
P04224 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
P04224 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
P04224 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.09□□□□□ -0.15
P04224 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
P04224 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.09□□□□□ -0.15
P04224 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.09□□□□□ -0.15
P04224 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.09□□□□□ -0.15
P04224 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.09□□□□□ -0.15
P04224 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Gm37292-201ENSMUST00000192062 758 ntBASIC14.09□□□□□ -0.15
P04224 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.09□□□□□ -0.15
P04224 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.09□□□□□ -0.15
P04224 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
P04224 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04224 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.09□□□□□ -0.15
P04224 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
P04224 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04224 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.08□□□□□ -0.15
P04224 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04224 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04224 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04224 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
P04224 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
P04224 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04224 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
P04224 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
P04224 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.08□□□□□ -0.16
P04224 Gm24841-201ENSMUST00000158676 357 ntBASIC14.08□□□□□ -0.16
P04224 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.08□□□□□ -0.16
P04224 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.08□□□□□ -0.16
P04224 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.08□□□□□ -0.16
P04224 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
P04224 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
P04224 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.08□□□□□ -0.16
P04224 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
P04224 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04224 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.07□□□□□ -0.16
P04224 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.07□□□□□ -0.16
P04224 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.07□□□□□ -0.16
P04224 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.07□□□□□ -0.16
P04224 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Gm18666-201ENSMUST00000190039 958 ntBASIC14.07□□□□□ -0.16
P04224 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.07□□□□□ -0.16
P04224 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.07□□□□□ -0.16
P04224 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.07□□□□□ -0.16
P04224 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
P04224 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms