Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.54■□□□□ 0.72
Col4a1P02463 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.54■□□□□ 0.72
Col4a1P02463 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.54■□□□□ 0.72
Col4a1P02463 Gm27494-201ENSMUST00000184735 189 ntBASIC19.54■□□□□ 0.72
Col4a1P02463 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.54■□□□□ 0.72
Col4a1P02463 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Col4a1P02463 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col4a1P02463 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.53■□□□□ 0.72
Col4a1P02463 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.53■□□□□ 0.72
Col4a1P02463 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.53■□□□□ 0.72
Col4a1P02463 Gm8396-201ENSMUST00000057361 823 ntBASIC19.53■□□□□ 0.72
Col4a1P02463 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Col4a1P02463 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Col4a1P02463 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.53■□□□□ 0.72
Col4a1P02463 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col4a1P02463 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.52■□□□□ 0.72
Col4a1P02463 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.52■□□□□ 0.72
Col4a1P02463 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.52■□□□□ 0.72
Col4a1P02463 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Col4a1P02463 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col4a1P02463 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.71
Col4a1P02463 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.52■□□□□ 0.71
Col4a1P02463 Gm7787-201ENSMUST00000216858 688 ntBASIC19.52■□□□□ 0.71
Col4a1P02463 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a1P02463 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col4a1P02463 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Col4a1P02463 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a1P02463 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a1P02463 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a1P02463 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.51■□□□□ 0.71
Col4a1P02463 Gm13616-201ENSMUST00000120600 222 ntBASIC19.51■□□□□ 0.71
Col4a1P02463 Gm13365-201ENSMUST00000121188 973 ntBASIC19.51■□□□□ 0.71
Col4a1P02463 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Col4a1P02463 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col4a1P02463 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.51■□□□□ 0.71
Col4a1P02463 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Col4a1P02463 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Col4a1P02463 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Col4a1P02463 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.5■□□□□ 0.71
Col4a1P02463 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a1P02463 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a1P02463 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a1P02463 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a1P02463 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.5■□□□□ 0.71
Col4a1P02463 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a1P02463 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a1P02463 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.5■□□□□ 0.71
Col4a1P02463 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a1P02463 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col4a1P02463 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Gm9385-201ENSMUST00000117563 472 ntBASIC19.49■□□□□ 0.71
Col4a1P02463 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.49■□□□□ 0.71
Col4a1P02463 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.49■□□□□ 0.71
Col4a1P02463 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.49■□□□□ 0.71
Col4a1P02463 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.49■□□□□ 0.71
Col4a1P02463 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.49■□□□□ 0.71
Col4a1P02463 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col4a1P02463 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms