Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CopeO89079 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.56■□□□□ 0.24
CopeO89079 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.56■□□□□ 0.24
CopeO89079 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.56■□□□□ 0.24
CopeO89079 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.56■□□□□ 0.24
CopeO89079 Gm7370-201ENSMUST00000219471 767 ntBASIC16.56■□□□□ 0.24
CopeO89079 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CopeO89079 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CopeO89079 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CopeO89079 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CopeO89079 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.55■□□□□ 0.24
CopeO89079 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.55■□□□□ 0.24
CopeO89079 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.55■□□□□ 0.24
CopeO89079 Gm29707-201ENSMUST00000196325 491 ntBASIC16.55■□□□□ 0.24
CopeO89079 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CopeO89079 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CopeO89079 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CopeO89079 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CopeO89079 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CopeO89079 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CopeO89079 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.54■□□□□ 0.24
CopeO89079 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CopeO89079 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CopeO89079 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.54■□□□□ 0.24
CopeO89079 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.54■□□□□ 0.24
CopeO89079 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.54■□□□□ 0.24
CopeO89079 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CopeO89079 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.54■□□□□ 0.24
CopeO89079 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CopeO89079 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CopeO89079 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CopeO89079 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CopeO89079 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CopeO89079 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
CopeO89079 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CopeO89079 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CopeO89079 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.53■□□□□ 0.24
CopeO89079 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Gm11336-201ENSMUST00000118168 334 ntBASIC16.53■□□□□ 0.24
CopeO89079 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CopeO89079 Mir5122-201ENSMUST00000175004 89 ntBASIC16.53■□□□□ 0.24
CopeO89079 Gm8520-201ENSMUST00000186517 868 ntBASIC16.53■□□□□ 0.24
CopeO89079 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CopeO89079 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CopeO89079 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CopeO89079 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CopeO89079 Gm13474-201ENSMUST00000122466 815 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms