Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.44■□□□□ 0.22
Syn1O88935 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.43■□□□□ 0.22
Syn1O88935 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.43■□□□□ 0.22
Syn1O88935 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.43■□□□□ 0.22
Syn1O88935 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.43■□□□□ 0.22
Syn1O88935 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Syn1O88935 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Syn1O88935 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.42■□□□□ 0.22
Syn1O88935 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Syn1O88935 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Gm18622-201ENSMUST00000219361 595 ntBASIC16.42■□□□□ 0.22
Syn1O88935 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Syn1O88935 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Syn1O88935 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.42■□□□□ 0.22
Syn1O88935 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syn1O88935 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Syn1O88935 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Syn1O88935 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Syn1O88935 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.41■□□□□ 0.22
Syn1O88935 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Syn1O88935 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syn1O88935 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Syn1O88935 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Syn1O88935 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.41■□□□□ 0.22
Syn1O88935 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syn1O88935 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.4■□□□□ 0.22
Syn1O88935 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Syn1O88935 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.4■□□□□ 0.22
Syn1O88935 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syn1O88935 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Syn1O88935 Gm8825-201ENSMUST00000182565 998 ntBASIC16.4■□□□□ 0.22
Syn1O88935 Gm37153-201ENSMUST00000193637 231 ntBASIC16.4■□□□□ 0.22
Syn1O88935 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.4■□□□□ 0.22
Syn1O88935 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.4■□□□□ 0.22
Syn1O88935 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syn1O88935 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Syn1O88935 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syn1O88935 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Syn1O88935 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Syn1O88935 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.4■□□□□ 0.22
Syn1O88935 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syn1O88935 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Syn1O88935 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Syn1O88935 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Syn1O88935 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Syn1O88935 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.39■□□□□ 0.21
Syn1O88935 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syn1O88935 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.39■□□□□ 0.21
Syn1O88935 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.39■□□□□ 0.21
Syn1O88935 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.39■□□□□ 0.21
Syn1O88935 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
Syn1O88935 Gm22175-201ENSMUST00000175007 78 ntBASIC16.39■□□□□ 0.21
Syn1O88935 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.39■□□□□ 0.21
Syn1O88935 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms