Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Gm44450-201ENSMUST00000199528 114 ntBASIC11.36□□□□□ -0.59
Sh2d1aO88890 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sh2d1aO88890 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Gm6433-201ENSMUST00000118634 875 ntBASIC11.35□□□□□ -0.59
Sh2d1aO88890 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.35□□□□□ -0.59
Sh2d1aO88890 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Mir1668-201ENSMUST00000184114 107 ntBASIC11.35□□□□□ -0.59
Sh2d1aO88890 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sh2d1aO88890 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Gm22697-201ENSMUST00000175194 63 ntBASIC11.34□□□□□ -0.59
Sh2d1aO88890 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Gm27389-201ENSMUST00000183622 195 ntBASIC11.34□□□□□ -0.59
Sh2d1aO88890 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sh2d1aO88890 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms