Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cldn1O88551 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.72□□□□□ -0.21
Cldn1O88551 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.72□□□□□ -0.21
Cldn1O88551 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.72□□□□□ -0.21
Cldn1O88551 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cldn1O88551 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.72□□□□□ -0.21
Cldn1O88551 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cldn1O88551 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.72□□□□□ -0.21
Cldn1O88551 AV026068-213ENSMUST00000223675 1171 ntBASIC13.72□□□□□ -0.21
Cldn1O88551 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cldn1O88551 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cldn1O88551 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cldn1O88551 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cldn1O88551 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cldn1O88551 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.71□□□□□ -0.21
Cldn1O88551 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cldn1O88551 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Cldn1O88551 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 Gm26308-201ENSMUST00000157768 69 ntBASIC13.71□□□□□ -0.21
Cldn1O88551 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Cldn1O88551 Gm27628-201ENSMUST00000184911 107 ntBASIC13.71□□□□□ -0.21
Cldn1O88551 Gm6550-201ENSMUST00000187574 993 ntBASIC13.71□□□□□ -0.21
Cldn1O88551 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cldn1O88551 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.71□□□□□ -0.21
Cldn1O88551 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cldn1O88551 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cldn1O88551 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cldn1O88551 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cldn1O88551 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cldn1O88551 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Cldn1O88551 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Cldn1O88551 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.7□□□□□ -0.22
Cldn1O88551 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cldn1O88551 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.7□□□□□ -0.22
Cldn1O88551 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Gm25911-201ENSMUST00000157621 56 ntBASIC13.7□□□□□ -0.22
Cldn1O88551 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.7□□□□□ -0.22
Cldn1O88551 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cldn1O88551 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cldn1O88551 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.7□□□□□ -0.22
Cldn1O88551 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cldn1O88551 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cldn1O88551 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cldn1O88551 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cldn1O88551 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cldn1O88551 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Gm13036-201ENSMUST00000117799 748 ntBASIC13.69□□□□□ -0.22
Cldn1O88551 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Cldn1O88551 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.69□□□□□ -0.22
Cldn1O88551 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cldn1O88551 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.69□□□□□ -0.22
Cldn1O88551 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.69□□□□□ -0.22
Cldn1O88551 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms