Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cacna1hO88427 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cacna1hO88427 Syt7-205ENSMUST00000224135 1557 ntBASIC15.53■□□□□ 0.08
Cacna1hO88427 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.53■□□□□ 0.08
Cacna1hO88427 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cacna1hO88427 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
Cacna1hO88427 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.53■□□□□ 0.08
Cacna1hO88427 Gm27680-201ENSMUST00000184192 160 ntBASIC15.53■□□□□ 0.08
Cacna1hO88427 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.53■□□□□ 0.08
Cacna1hO88427 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Cacna1hO88427 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cacna1hO88427 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cacna1hO88427 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.53■□□□□ 0.08
Cacna1hO88427 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cacna1hO88427 Gm6180-201ENSMUST00000065243 498 ntBASIC15.53■□□□□ 0.08
Cacna1hO88427 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1hO88427 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1hO88427 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1hO88427 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.52■□□□□ 0.08
Cacna1hO88427 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.52■□□□□ 0.08
Cacna1hO88427 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.52■□□□□ 0.08
Cacna1hO88427 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.52■□□□□ 0.08
Cacna1hO88427 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Cacna1hO88427 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.52■□□□□ 0.08
Cacna1hO88427 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1hO88427 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1hO88427 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1hO88427 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cacna1hO88427 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1hO88427 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.52■□□□□ 0.07
Cacna1hO88427 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1hO88427 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1hO88427 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1hO88427 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1hO88427 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1hO88427 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cacna1hO88427 Gm11478-201ENSMUST00000117851 599 ntBASIC15.51■□□□□ 0.07
Cacna1hO88427 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.51■□□□□ 0.07
Cacna1hO88427 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Gm8410-201ENSMUST00000117225 605 ntBASIC15.51■□□□□ 0.07
Cacna1hO88427 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.51■□□□□ 0.07
Cacna1hO88427 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cacna1hO88427 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Cacna1hO88427 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cacna1hO88427 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cacna1hO88427 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.5■□□□□ 0.07
Cacna1hO88427 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.5■□□□□ 0.07
Cacna1hO88427 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Cacna1hO88427 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cacna1hO88427 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.5■□□□□ 0.07
Cacna1hO88427 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cacna1hO88427 AY702102-202ENSMUST00000194651 1173 ntBASIC15.5■□□□□ 0.07
Cacna1hO88427 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cacna1hO88427 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.49■□□□□ 0.07
Cacna1hO88427 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.49■□□□□ 0.07
Cacna1hO88427 Gm29541-201ENSMUST00000191351 678 ntBASIC15.49■□□□□ 0.07
Cacna1hO88427 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cacna1hO88427 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms