Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
IkbkbO88351 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
IkbkbO88351 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.69■□□□□ 0.42
IkbkbO88351 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
IkbkbO88351 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.69■□□□□ 0.42
IkbkbO88351 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IkbkbO88351 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IkbkbO88351 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.68■□□□□ 0.42
IkbkbO88351 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IkbkbO88351 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
IkbkbO88351 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.68■□□□□ 0.42
IkbkbO88351 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IkbkbO88351 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IkbkbO88351 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
IkbkbO88351 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.68■□□□□ 0.42
IkbkbO88351 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
IkbkbO88351 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IkbkbO88351 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IkbkbO88351 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IkbkbO88351 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
IkbkbO88351 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.67■□□□□ 0.42
IkbkbO88351 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.67■□□□□ 0.42
IkbkbO88351 Gm10052-201ENSMUST00000168019 960 ntBASIC17.67■□□□□ 0.42
IkbkbO88351 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.67■□□□□ 0.42
IkbkbO88351 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.67■□□□□ 0.42
IkbkbO88351 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.67■□□□□ 0.42
IkbkbO88351 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Gm7729-201ENSMUST00000050143 801 ntBASIC17.67■□□□□ 0.42
IkbkbO88351 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
IkbkbO88351 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
IkbkbO88351 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Prob1-201ENSMUST00000097619 3021 ntBASIC17.67■□□□□ 0.42
IkbkbO88351 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.67■□□□□ 0.42
IkbkbO88351 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
IkbkbO88351 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.67■□□□□ 0.42
IkbkbO88351 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.67■□□□□ 0.42
IkbkbO88351 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
IkbkbO88351 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.66■□□□□ 0.42
IkbkbO88351 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
IkbkbO88351 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
IkbkbO88351 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.66■□□□□ 0.42
IkbkbO88351 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
IkbkbO88351 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
IkbkbO88351 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.66■□□□□ 0.42
IkbkbO88351 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
IkbkbO88351 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
IkbkbO88351 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.65■□□□□ 0.42
IkbkbO88351 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.65■□□□□ 0.42
IkbkbO88351 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
IkbkbO88351 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.65■□□□□ 0.42
IkbkbO88351 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
IkbkbO88351 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms