Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pdlim3O70209 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdlim3O70209 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.53□□□□□ -0.08
Pdlim3O70209 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim3O70209 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Gm715-201ENSMUST00000117865 831 ntBASIC14.53□□□□□ -0.08
Pdlim3O70209 Gm20760-201ENSMUST00000179197 648 ntBASIC14.53□□□□□ -0.08
Pdlim3O70209 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim3O70209 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim3O70209 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim3O70209 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim3O70209 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim3O70209 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim3O70209 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim3O70209 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim3O70209 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pdlim3O70209 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim3O70209 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim3O70209 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim3O70209 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Pdlim3O70209 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim3O70209 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.52□□□□□ -0.09
Pdlim3O70209 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.52□□□□□ -0.09
Pdlim3O70209 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.52□□□□□ -0.09
Pdlim3O70209 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.52□□□□□ -0.09
Pdlim3O70209 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim3O70209 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim3O70209 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim3O70209 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim3O70209 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim3O70209 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.52□□□□□ -0.09
Pdlim3O70209 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim3O70209 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Gm10653-202ENSMUST00000139570 835 ntBASIC14.51□□□□□ -0.09
Pdlim3O70209 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Gm29707-201ENSMUST00000196325 491 ntBASIC14.51□□□□□ -0.09
Pdlim3O70209 Gm21814-202ENSMUST00000203277 873 ntBASIC14.51□□□□□ -0.09
Pdlim3O70209 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.51□□□□□ -0.09
Pdlim3O70209 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim3O70209 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim3O70209 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms