Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trdmt1O55055 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trdmt1O55055 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trdmt1O55055 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trdmt1O55055 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trdmt1O55055 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Trdmt1O55055 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.58■□□□□ 0.4
Trdmt1O55055 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 Gm6257-201ENSMUST00000163864 910 ntBASIC17.58■□□□□ 0.4
Trdmt1O55055 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.58■□□□□ 0.4
Trdmt1O55055 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.58■□□□□ 0.4
Trdmt1O55055 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.58■□□□□ 0.4
Trdmt1O55055 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trdmt1O55055 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trdmt1O55055 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trdmt1O55055 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trdmt1O55055 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Trdmt1O55055 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.57■□□□□ 0.4
Trdmt1O55055 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.57■□□□□ 0.4
Trdmt1O55055 Gm9682-201ENSMUST00000197505 556 ntBASIC17.57■□□□□ 0.4
Trdmt1O55055 Gm19164-201ENSMUST00000210667 640 ntBASIC17.57■□□□□ 0.4
Trdmt1O55055 Gm7787-201ENSMUST00000216858 688 ntBASIC17.57■□□□□ 0.4
Trdmt1O55055 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trdmt1O55055 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trdmt1O55055 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trdmt1O55055 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.57■□□□□ 0.4
Trdmt1O55055 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.57■□□□□ 0.4
Trdmt1O55055 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trdmt1O55055 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.56■□□□□ 0.4
Trdmt1O55055 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.56■□□□□ 0.4
Trdmt1O55055 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Gm17271-201ENSMUST00000165535 355 ntBASIC17.56■□□□□ 0.4
Trdmt1O55055 Gm18489-201ENSMUST00000172565 551 ntBASIC17.56■□□□□ 0.4
Trdmt1O55055 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.56■□□□□ 0.4
Trdmt1O55055 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trdmt1O55055 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trdmt1O55055 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trdmt1O55055 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.55■□□□□ 0.4
Trdmt1O55055 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trdmt1O55055 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.55■□□□□ 0.4
Trdmt1O55055 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trdmt1O55055 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Trdmt1O55055 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trdmt1O55055 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trdmt1O55055 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trdmt1O55055 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms