Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.28□□□□□ -0.28
SncaO55042 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SncaO55042 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.28□□□□□ -0.28
SncaO55042 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SncaO55042 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SncaO55042 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SncaO55042 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SncaO55042 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SncaO55042 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SncaO55042 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SncaO55042 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SncaO55042 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.27□□□□□ -0.28
SncaO55042 Sybu-209ENSMUST00000228639 4113 ntBASIC13.27□□□□□ -0.28
SncaO55042 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SncaO55042 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SncaO55042 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.27□□□□□ -0.29
SncaO55042 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.27□□□□□ -0.29
SncaO55042 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.27□□□□□ -0.29
SncaO55042 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Gm2274-201ENSMUST00000184539 609 ntBASIC13.27□□□□□ -0.29
SncaO55042 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
SncaO55042 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.27□□□□□ -0.29
SncaO55042 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.27□□□□□ -0.29
SncaO55042 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.27□□□□□ -0.29
SncaO55042 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SncaO55042 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
SncaO55042 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.26□□□□□ -0.29
SncaO55042 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.26□□□□□ -0.29
SncaO55042 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.26□□□□□ -0.29
SncaO55042 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SncaO55042 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.25□□□□□ -0.29
SncaO55042 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SncaO55042 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.25□□□□□ -0.29
SncaO55042 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SncaO55042 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SncaO55042 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SncaO55042 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.25□□□□□ -0.29
SncaO55042 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.25□□□□□ -0.29
SncaO55042 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.25□□□□□ -0.29
SncaO55042 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.25□□□□□ -0.29
SncaO55042 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Gm5417-201ENSMUST00000079706 384 ntBASIC13.25□□□□□ -0.29
SncaO55042 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SncaO55042 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SncaO55042 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms