Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.51□□□□□ -0.25
Cxcl13O55038 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.51□□□□□ -0.25
Cxcl13O55038 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.51□□□□□ -0.25
Cxcl13O55038 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.51□□□□□ -0.25
Cxcl13O55038 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cxcl13O55038 Gm15590-201ENSMUST00000078419 552 ntBASIC13.51□□□□□ -0.25
Cxcl13O55038 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.51□□□□□ -0.25
Cxcl13O55038 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Gm27525-201ENSMUST00000184465 107 ntBASIC13.5□□□□□ -0.25
Cxcl13O55038 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cxcl13O55038 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl13O55038 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cxcl13O55038 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Cxcl13O55038 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.49□□□□□ -0.25
Cxcl13O55038 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.49□□□□□ -0.25
Cxcl13O55038 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.49□□□□□ -0.25
Cxcl13O55038 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.49□□□□□ -0.25
Cxcl13O55038 Gm5364-201ENSMUST00000216789 889 ntBASIC13.49□□□□□ -0.25
Cxcl13O55038 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cxcl13O55038 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.49□□□□□ -0.25
Cxcl13O55038 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl13O55038 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.48□□□□□ -0.25
Cxcl13O55038 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cxcl13O55038 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl13O55038 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.48□□□□□ -0.25
Cxcl13O55038 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.48□□□□□ -0.25
Cxcl13O55038 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl13O55038 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cxcl13O55038 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl13O55038 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl13O55038 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms