Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Banf1O54962 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Banf1O54962 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.32■□□□□ 0.2
Banf1O54962 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Banf1O54962 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.32■□□□□ 0.2
Banf1O54962 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 Mir1668-201ENSMUST00000184114 107 ntBASIC16.32■□□□□ 0.2
Banf1O54962 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.32■□□□□ 0.2
Banf1O54962 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Banf1O54962 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Banf1O54962 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Banf1O54962 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Banf1O54962 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Banf1O54962 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Banf1O54962 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Banf1O54962 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Banf1O54962 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Banf1O54962 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Banf1O54962 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Banf1O54962 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Banf1O54962 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Banf1O54962 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.3■□□□□ 0.2
Banf1O54962 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.3■□□□□ 0.2
Banf1O54962 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.3■□□□□ 0.2
Banf1O54962 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Banf1O54962 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.3■□□□□ 0.2
Banf1O54962 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Banf1O54962 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Banf1O54962 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Banf1O54962 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.29■□□□□ 0.2
Banf1O54962 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.29■□□□□ 0.2
Banf1O54962 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.29■□□□□ 0.2
Banf1O54962 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.29■□□□□ 0.2
Banf1O54962 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.29■□□□□ 0.2
Banf1O54962 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Banf1O54962 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.29■□□□□ 0.2
Banf1O54962 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Banf1O54962 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Gm15565-201ENSMUST00000118890 427 ntBASIC16.28■□□□□ 0.2
Banf1O54962 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.28■□□□□ 0.2
Banf1O54962 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.28■□□□□ 0.2
Banf1O54962 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Gm45058-201ENSMUST00000205810 766 ntBASIC16.28■□□□□ 0.2
Banf1O54962 Gm18959-201ENSMUST00000208954 655 ntBASIC16.28■□□□□ 0.2
Banf1O54962 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Banf1O54962 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Banf1O54962 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms