Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ccr6O54689 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccr6O54689 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.48□□□□□ -0.25
Ccr6O54689 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.48□□□□□ -0.25
Ccr6O54689 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccr6O54689 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ccr6O54689 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccr6O54689 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccr6O54689 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.48□□□□□ -0.25
Ccr6O54689 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.48□□□□□ -0.25
Ccr6O54689 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccr6O54689 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccr6O54689 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccr6O54689 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Ccr6O54689 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ccr6O54689 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccr6O54689 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccr6O54689 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccr6O54689 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Ccr6O54689 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccr6O54689 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccr6O54689 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.46□□□□□ -0.25
Ccr6O54689 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.46□□□□□ -0.26
Ccr6O54689 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccr6O54689 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccr6O54689 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms