Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Stag2O35638 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Stag2O35638 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Stag2O35638 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Stag2O35638 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Stag2O35638 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Stag2O35638 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.3■□□□□ 0.52
Stag2O35638 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.3■□□□□ 0.52
Stag2O35638 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Stag2O35638 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Stag2O35638 Gm8097-201ENSMUST00000117903 829 ntBASIC18.3■□□□□ 0.52
Stag2O35638 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Stag2O35638 Mzt1-203ENSMUST00000227948 952 ntBASIC18.3■□□□□ 0.52
Stag2O35638 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.3■□□□□ 0.52
Stag2O35638 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Stag2O35638 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stag2O35638 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Stag2O35638 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.29■□□□□ 0.52
Stag2O35638 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Stag2O35638 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.29■□□□□ 0.52
Stag2O35638 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.29■□□□□ 0.52
Stag2O35638 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.29■□□□□ 0.52
Stag2O35638 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stag2O35638 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Stag2O35638 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Stag2O35638 Gm13418-201ENSMUST00000119097 944 ntBASIC18.28■□□□□ 0.52
Stag2O35638 Gm7862-201ENSMUST00000121461 292 ntBASIC18.28■□□□□ 0.52
Stag2O35638 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.28■□□□□ 0.52
Stag2O35638 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.28■□□□□ 0.52
Stag2O35638 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Stag2O35638 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.28■□□□□ 0.52
Stag2O35638 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Stag2O35638 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Stag2O35638 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stag2O35638 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.27■□□□□ 0.52
Stag2O35638 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Stag2O35638 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Stag2O35638 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Stag2O35638 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.27■□□□□ 0.52
Stag2O35638 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm8825-201ENSMUST00000182565 998 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm4518-201ENSMUST00000182638 718 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Stag2O35638 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.27■□□□□ 0.52
Stag2O35638 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms