Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcn6O35454 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.23■□□□□ 0.35
Clcn6O35454 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.23■□□□□ 0.35
Clcn6O35454 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC17.23■□□□□ 0.35
Clcn6O35454 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.23■□□□□ 0.35
Clcn6O35454 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.23■□□□□ 0.35
Clcn6O35454 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.23■□□□□ 0.35
Clcn6O35454 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Clcn6O35454 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.23■□□□□ 0.35
Clcn6O35454 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Clcn6O35454 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Clcn6O35454 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcn6O35454 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Clcn6O35454 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcn6O35454 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcn6O35454 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.22■□□□□ 0.35
Clcn6O35454 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcn6O35454 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Gm24841-201ENSMUST00000158676 357 ntBASIC17.22■□□□□ 0.35
Clcn6O35454 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clcn6O35454 Gm28180-201ENSMUST00000189608 722 ntBASIC17.22■□□□□ 0.35
Clcn6O35454 Gm38217-201ENSMUST00000194358 910 ntBASIC17.22■□□□□ 0.35
Clcn6O35454 Gm6653-201ENSMUST00000218063 1288 ntBASIC17.22■□□□□ 0.35
Clcn6O35454 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcn6O35454 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Clcn6O35454 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Clcn6O35454 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clcn6O35454 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Clcn6O35454 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcn6O35454 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcn6O35454 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcn6O35454 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Clcn6O35454 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clcn6O35454 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clcn6O35454 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Clcn6O35454 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.21■□□□□ 0.35
Clcn6O35454 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC17.21■□□□□ 0.35
Clcn6O35454 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clcn6O35454 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.21■□□□□ 0.35
Clcn6O35454 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.21■□□□□ 0.35
Clcn6O35454 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clcn6O35454 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Clcn6O35454 Gm10617-201ENSMUST00000098368 1172 ntBASIC17.21■□□□□ 0.35
Clcn6O35454 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clcn6O35454 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Clcn6O35454 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.21■□□□□ 0.35
Clcn6O35454 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Clcn6O35454 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clcn6O35454 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.21■□□□□ 0.34
Clcn6O35454 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clcn6O35454 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Clcn6O35454 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Clcn6O35454 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcn6O35454 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms