Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.81□□□□□ -0.04
Capn1O35350 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Capn1O35350 Mir8098-201ENSMUST00000184011 137 ntBASIC14.81□□□□□ -0.04
Capn1O35350 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Capn1O35350 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Capn1O35350 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.81□□□□□ -0.04
Capn1O35350 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.81□□□□□ -0.04
Capn1O35350 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.81□□□□□ -0.04
Capn1O35350 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Capn1O35350 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Capn1O35350 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Capn1O35350 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Capn1O35350 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Capn1O35350 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.8□□□□□ -0.04
Capn1O35350 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Capn1O35350 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.8□□□□□ -0.04
Capn1O35350 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.8□□□□□ -0.04
Capn1O35350 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Capn1O35350 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.8□□□□□ -0.04
Capn1O35350 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Capn1O35350 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.8□□□□□ -0.04
Capn1O35350 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Capn1O35350 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Capn1O35350 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Capn1O35350 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.79□□□□□ -0.04
Capn1O35350 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.79□□□□□ -0.04
Capn1O35350 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Capn1O35350 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.79□□□□□ -0.04
Capn1O35350 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.79□□□□□ -0.04
Capn1O35350 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Capn1O35350 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.79□□□□□ -0.04
Capn1O35350 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.79□□□□□ -0.04
Capn1O35350 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Capn1O35350 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.78□□□□□ -0.04
Capn1O35350 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.78□□□□□ -0.04
Capn1O35350 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Capn1O35350 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Capn1O35350 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms